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Annotation


Shelton CC, Zhu L, Chau D, Yang L, Wang R, Djaballah H, Zheng H, Li YM. Modulation of gamma-secretase specificity using small molecule allosteric inhibitors. Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20228-33. PubMed Abstract

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  Comment by:  Boris Schmidt (Disclosure)
Submitted 20 November 2009  |  Permalink Posted 20 November 2009

This is an interesting paper. The lead structure, hydroxycoumarin, is rapidly accessible and thus quite well known; SciFinder lists 560 close analogues covering 193 publications. The compound class is a frequent hitter in high throughput screening assays. A fraction of these hits may be due to its intrinsic UV absorption and metal chelation properties. Several close analogues inhibit urease (WO 2008033466), tyrosinase (Casañola-Martín et al., 2008), HIV-1 integrase (Saíz-Urra et al., 2007) and other enzymes.

Many of these hydroxycoumarins strongly complex iron(II/III) or copper(II). Some metal complexes are cytotoxic: Cerium(III) and neodymium(III) complexes act as scavengers of X/XO-derived superoxide radical (Medicinal Chemistry 2006, 463-470). The lipophilicity of these compounds is within druglikeness (CS-1 clog P = 4.1), however the topological polar surface area is close to the limits of CNS applications...  Read more

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REAGENTS/MATERIAL:
In vitro Notch assay used a recombinant transmembrane portion of the Notch peptide and anti-Notch1 SM320 antibody; Labeled presenilin was isolated using streptavidin beads, separated by SDS/PAGE, and subsequently Western blotted using anti-PS1-NTF antibodies (a kind gift of Dr. Min-tain Lai, Merck Research Labratories); Generated AICD and APP-CTFs were detected by Western blotting using APPc antibody; Delta-E Notch protein was confirmed by anti-Myc antibody; Amyloid cleaved product was detected using ruthenylated mouse monoclonal antibodies that recognize specific APP cleavage sites (Aβ1–38*, G2–10*, or G2–11* antibody for Aβ38, Aβ40, or Aβ42, respectively); The Notch intracellular domain (NICD) and Notch cleaved product was detected using the affinity polyclonal anti-NICD-1 antibody (SM320), which recognizes the cleaved product and not the substrate; Aliquots of 1.0 mL conditioned media (DME-HG, Opti-Mem, 10% FBS, Pen/Strep, G418) from N2A mouse neuroblastoma cells overexpressing APP Swedish mutation were immunoprecipitated by monoclonal antibody 4G8.

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