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First Crystal Structure of Monoclonal Antibody Binding to Aβ
3 October 2007. In the September 25 PNAS online, researchers led by Chris Dealwis at the University of Tennessee in Knoxville published the first crystal structure of a monoclonal antibody to the amyloid-β (Aβ) peptide. Several antibodies have moved into clinical trials for passive immunotherapy of Alzheimer disease. Yet their proponents readily admit that if any of these succeed, a certain dose of good luck will have had a hand in the success, as well. That’s because scientists remain far from fully understanding the particular characteristics of antibody-Aβ binding that make a therapeutic antibody safe and effective in the AD brain. X-ray crystallography is a step in this direction. It provides not only the basis for examining molecular forces and side chains engaged in antibody-antigen recognition, but also a starting point for structure-based design to refine currently available antibodies.

Electrostatic potential surface of antibody with bound Aβ peptide. Blue: positive charge, red: negative charge, white: apolar surface. Aβ(1-8) is drawn with carbon (yellow), nitrogen (blue), and oxygen (red). The Arg 5 residue sits in a pocket of strong negative charge. Glu 3 has no correspondingly positive region around it, making this position susceptible to substitution and cross-reaction. Image credit: Chris Dealwis

Anna Gardberg and colleagues generated several new monoclonal IgGs against stabilized protofibrils of Aβ40. They crystallized the antigen-binding fragments (Fabs) of two of them and found one to be complexed with the immunogenic Aβ (1-8) sequence and the other, to their surprise, with a similar sequence found in the human glutamate receptor interacting protein GRIP1 (Guo and Wang, 2007; Kulangara et al., 2007). The scientists characterize the atomic forces and a WWDDD motif with which the antibodies recognize these two similar peptide sequences. The Alzforum caught Chris Dealwis on the eve of a move. Our thanks to him for shooting off some brief last-minute replies from amid the boxes. See Q&A below.—Gabrielle Strobel.

Reference:
Gardberg AS, Dice LT, Ou S, Rich RL, Helmbrecht E, Ko J, Wetzel R, Myszka DG, Patterson PH, Dealwis C. Molecular basis for passive immunotherapy of Alzheimer's disease. Proc Natl Acad Sci U S A. 2007 Oct 2 ; 104(40):15659-64. Abstract

Q&A with Chris Dealwis. Questions by Gabrielle Strobel.

Q: Is it possible to do the same research with other Aβ antibodies?
A: Yes, if they have similar binding affinities.

Q: How about the A11?
A: If Charles Glabe's antibody is a monoclonal, then it will be a very interesting mAb to crystallize.

Q: How about the m266?
A:Maybe.

Q: The 3D6?
A: Possibly.

Q: Are you already working on any of the better-known antibodies in this field, or planning to?
A: Yes.

Q: Would you expect to see the same or similar WWDDD motif in the binding region of other antibodies to Aβ? In other words, do you think this is a common feature of N-terminal Aβ antibodies?
A: Not always.

Q: This is the first public crystal structure of an Aβ-monoclonal antibody complex I am aware of. Crystallography projects can be famously Herculean efforts. Was this one especially difficult to do?
A: Yes!

Q: Can your structure guide “rational drug designers” on how to improve the current crop of therapeutic antibodies? What would the structure suggest they change, for example?
A: Yes, it will improve affinity and specificity.

Q: Can the reactivity to a sequence of the human GRIP1 protein, or to the Ror2 sequence, be engineered out of the antibody without losing binding to Aβ?
A: I think so.

Q: GRIP1 is a post-synaptic scaffolding protein thought to play some role in synaptic activity, possibly through AMPA receptors. Current research also focuses on Aβ's possible role in AMPA receptor regulation. Pure coincidence?
A: Interesting, isn't it?

 
Comments on News and Primary Papers
  Primary Papers: Molecular basis for passive immunotherapy of Alzheimer's disease.

Comment by:  Paul Coleman, ARF Advisor
Submitted 28 September 2007  |  Permalink Posted 1 October 2007
  I recommend this paper

  Primary Papers: Molecular basis for passive immunotherapy of Alzheimer's disease.

Comment by:  Charles Glabe, ARF Advisor
Submitted 3 October 2007  |  Permalink Posted 3 October 2007

Anti-amyloid immunotherapy remains one of the front-line strategies for the development of Alzheimer therapeutics. Both passive and active immunization are currently under active development for human clinical application. Antibodies that target the amino terminus of Aβ seem particularly interesting. Not only does this region appear to be an immuno-dominant site, but antibodies that recognize epitopes in this region also seem particularly effective in reversing AD pathogenesis in transgenic animals and in depolymerizing amyloid fibrils in vitro. In this article, Chris Dealwis and colleagues report the crystal structures of two monoclonal antibodies that target the amino terminus of Aβ.

These antibodies, PFA1 and PFA2, are remarkably specific for the EFRHD sequence at residues 3-7 of the Aβ peptide, as substitution of an alanine residue at any position nearly eliminates antibody binding. The crystal structures of the Fab complex with the peptide DAEFRHDS reveals that a WWDDD motif in the heavy chain complementarity determining region (CDR) of the antibodies forms salt...  Read more


  Comment by:  Beka Solomon
Submitted 3 October 2007  |  Permalink Posted 3 October 2007

The paper of Gardberg et al. (1) describes, in an elegant and convincing way, the molecular basis of immunotherapy with Aβ peptide anti-N-terminal antibodies. They report the isolation of two mAbs (PFA1 and PFA2) raised against stabilized protofibrils of Aβ, which recognize Aβ monomers, protofibrils, and fibrils. Importantly, they report the structures of their antigen binding fragments (Fabs) in complex with the Aβ(1-8) peptide DAEFRHDS.

As previously shown, immunization against the EFRH sequence rescues cognitive function in mouse models of Alzheimer disease. The EFRH epitope is available for antibody binding when Aβ peptide is either in solution or is an aggregate, and locking of this epitope by antibodies affects the dynamics of all the molecules, preventing self-aggregation as well as enabling resolubilization of already formed aggregates (2-4). All these prior findings illustrate the importance of understanding the structural basis of antibody recognition of this sequence.

Among the proposed mechanisms of immunotherapy, the catalytic dissolution via antibodies,...  Read more


  Comment by:  Fred Van Leuven (Disclosure)
Submitted 8 October 2007  |  Permalink Posted 9 October 2007

I agree with Charles and Beka that this is excellent work. It's actually long overdue in the AD field, which is at the same time crowded and lacking some essential experts.

Nevertheless, I am more critical than my two learned friends and colleagues about the real meaning of this study for immunotherapy in AD. After careful reading—and discussion with an expert or two—we came to the conclusion that this paper sails under the wrong flag. A more apt title might have read: "Molecular Basis for Recognition of Epitope EFRHD on the Amyloid-β Peptide by a Monoclonal Antibody."

The data highlight in exquisite detail the structure of the peptide-antibody immune complex. But they do not address—and therefore do not answer—the primary question in AD immunotherapy: why do N-terminal-specific antibodies dissociate amyloid peptide aggregates, and thereby improve the cognitive functions of AD mice (and hopefully patients as well)?

I am convinced that this excellent paper will help considerably in paving the way to answer the first part of that question. At the same time, I cannot...  Read more

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